BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020B04LP1|AL427570
(993 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1703 1683 0.0
>3x_Contig1703
Length = 17919
Score = 1683 bits (848), Expect = 0.0
Identities = 898/908 (98%), Gaps = 6/908 (0%)
Strand = Plus / Plus
Query: 86 tttattatgttagctgtttttagaacaacttagaactacaattacgacaaaccctattag 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttattatgttagctgtttttagaacaacttagaactacaattacgacaaaccctattag 60
Query: 146 attaccgtataagtcaaagtatatcttataagtttgaaaggacaataaaagttcgatgtt 205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 attaccgtataagtcaaagtatatcttataagtttgaaaggacaataaaagttcgatgtt 120
Query: 206 ctgagaacagaataatgaaaagttggtagttggaaacctattatatttatattctg-ttt 264
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 121 ctgagaacagaataatgaaaagttggtagttggaaacctattatatttatattctgcttt 180
Query: 265 attcctggatatgttaggaagattcgatttgtgtcctgcgctagatgtttctgcaaatca 324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attcctggatatgttaggaagattcgatttgtgtcctgcgctagatgtttctgcaaatca 240
Query: 325 gaatttcatggaacgaagggttttaagtcacatgaaaaatgacatgtgaaaatttactta 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaatttcatggaacgaagggttttaagtcacatgaaaaatgacatgtgaaaatttactta 300
Query: 385 aaggtgagttgtttataatatcacgtgatttcaatttttgttagtgtgaaacatccagtt 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaggtgagttgtttataatatcacgtgatttcaatttttgttagtgtgaaacatccagtt 360
Query: 445 ggcacaatttgcgagagccacttactcagttcgtgaaggtggagggtaccttcggtcaat 504
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggcacaatttgcgagagcaacttactcagttcgtgaaggtggagggtaccttcggtcaat 420
Query: 505 accatgttacttgttattattctttgtcattttagacatatatctgcagaaaatgggact 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accatgttacttgttattattctttgtcattttagacatatatctgcagaaaatgggact 480
Query: 565 cttattattaacctgaaaaactgaaaagagatcatcatcaatggtgattcacagtgaaat 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cttattattaacctgaaaaactgaaaagagatcatcatcaatggtgattcacagtgaaat 540
Query: 625 tatagtaactacttagaagataagaggccccgtctttgaaattacaagctttgtaggtat 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tatagtaactacttagaagataagaggccccgtctttgaaattacaagctttgtaggtat 600
Query: 685 gagcctagtatcgtctgtatacttgagtgatagtgaaggcagtgatattgaaattgacgg 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gagcctagtatcgtctgtatacttgagtgatagtgaaggcagtgatattgaaattgacgg 660
Query: 745 ggaacttatccagaataaggaagaagaggacagaagctcaytgctaccaaacttaccaga 804
||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 661 ggaacctatccagaataaggaagaagaggacagaagctcattgctaccaaacttaccaga 720
Query: 805 ccaaatcattcacaagtttaataaaccaccagttctgaacccattgaacgatagaatgta 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccaaatcattcacaagtttaataaaccaccagttctgaacccattgaacgatagaatgta 780
Query: 865 caaagctccgatgggtagaaatacttgctatatgtttcttcagctgcggcttgattcc-a 923
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 781 caaagctccgatgggtagaaatacttgctatatgtttcttcagctgcggcttgattccaa 840
Query: 924 acagaaccgggtgcttgatatgattttgaacg-mgt-aactcagtaatg-acatgc-tca 979
|||||||||||||||||||||||||||||||| || |||||||||||| |||||| |||
Sbjct: 841 acagaaccgggtgcttgatatgattttgaacgacgtaaactcagtaatgaacatgcatca 900
Query: 980 tatgacta 987
||||||||
Sbjct: 901 tatgacta 908
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8044
Number of Sequences: 1807
Number of extensions: 8044
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 993
length of database: 10,358,551
effective HSP length: 16
effective length of query: 977
effective length of database: 10,329,639
effective search space: 10092057303
effective search space used: 10092057303
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)